Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 VAM7YGL212W 951 nt5.3□□□□□ -1.56
CDC40P40968 YJR142WYJR142W 1029 nt5.3□□□□□ -1.56
CDC40P40968 APN1YKL114C 1104 nt5.3□□□□□ -1.56
CDC40P40968 HRB1YNL004W 1365 nt5.29□□□□□ -1.56
CDC40P40968 PYK2YOR347C 1521 nt5.29□□□□□ -1.56
CDC40P40968 YML133CYML133C 4125 nt5.29□□□□□ -1.56
CDC40P40968 YMR135W-AYMR135W-A 534 nt5.29□□□□□ -1.56
CDC40P40968 YBR124WYBR124W 360 nt5.29□□□□□ -1.56
CDC40P40968 RBA50YDR527W 1320 nt5.28□□□□□ -1.56
CDC40P40968 MET7YOR241W 1647 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)BtG(GCC)B 71 nt5.28□□□□□ -1.56
CDC40P40968 SUF16tG(GCC)C 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)D1tG(GCC)D1 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)D2tG(GCC)D2 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)EtG(GCC)E 71 nt5.28□□□□□ -1.56
CDC40P40968 SUF20tG(GCC)F1 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)F2tG(GCC)F2 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)G1tG(GCC)G1 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)G2tG(GCC)G2 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)J1tG(GCC)J1 71 nt5.28□□□□□ -1.56
CDC40P40968 SUF23tG(GCC)J2 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)MtG(GCC)M 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)O1tG(GCC)O1 71 nt5.28□□□□□ -1.56
CDC40P40968 SUF17tG(GCC)O2 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)P1tG(GCC)P1 71 nt5.28□□□□□ -1.56
CDC40P40968 tG(GCC)P2tG(GCC)P2 71 nt5.28□□□□□ -1.56
CDC40P40968 BNS1YGR230W 414 nt5.28□□□□□ -1.56
CDC40P40968 CBR1YIL043C 855 nt5.28□□□□□ -1.56
CDC40P40968 YJL213WYJL213W 996 nt5.28□□□□□ -1.56
CDC40P40968 ICT1YLR099C 1185 nt5.28□□□□□ -1.56
CDC40P40968 RDL1YOR285W 420 nt5.28□□□□□ -1.56
CDC40P40968 MRP51YPL118W 1035 nt5.28□□□□□ -1.56
CDC40P40968 BZZ1YHR114W 1902 nt5.28□□□□□ -1.56
CDC40P40968 ATG18YFR021W 1503 nt5.28□□□□□ -1.56
CDC40P40968 APM4YOL062C 1476 nt5.27□□□□□ -1.57
CDC40P40968 YDL177CYDL177C 513 nt5.27□□□□□ -1.57
CDC40P40968 NSI1YDR026C 1713 nt5.27□□□□□ -1.57
CDC40P40968 FBA1YKL060C 1080 nt5.27□□□□□ -1.57
CDC40P40968 CBT1YKL208W 816 nt5.26□□□□□ -1.57
CDC40P40968 MRPS12YNR036C 462 nt5.26□□□□□ -1.57
CDC40P40968 RPS28AYOR167C 204 nt5.26□□□□□ -1.57
CDC40P40968 YBR113WYBR113W 483 nt5.26□□□□□ -1.57
CDC40P40968 VAN1YML115C 1608 nt5.26□□□□□ -1.57
CDC40P40968 ALT1YLR089C 1779 nt5.25□□□□□ -1.57
CDC40P40968 VPS61YDR136C 573 nt5.25□□□□□ -1.57
CDC40P40968 PIL1YGR086C 1020 nt5.25□□□□□ -1.57
CDC40P40968 YHR145CYHR145C 357 nt5.25□□□□□ -1.57
CDC40P40968 SWP1YMR149W 861 nt5.25□□□□□ -1.57
CDC40P40968 DPM1YPR183W 804 nt5.25□□□□□ -1.57
CDC40P40968 MSI1YBR195C 1269 nt5.25□□□□□ -1.57
CDC40P40968 TUL1YKL034W 2277 nt5.25□□□□□ -1.57
CDC40P40968 QRI1YDL103C 1434 nt5.24□□□□□ -1.57
CDC40P40968 YGL081WYGL081W 963 nt5.24□□□□□ -1.57
CDC40P40968 NMA2YGR010W 1188 nt5.24□□□□□ -1.57
CDC40P40968 YSC83YHR017W 1158 nt5.24□□□□□ -1.57
CDC40P40968 YNL092WYNL092W 1203 nt5.24□□□□□ -1.57
CDC40P40968 PEX3YDR329C 1326 nt5.23□□□□□ -1.57
CDC40P40968 RPP1YHR062C 882 nt5.23□□□□□ -1.57
CDC40P40968 NPT1YOR209C 1290 nt5.23□□□□□ -1.57
CDC40P40968 MFG1YDL233W 1377 nt5.23□□□□□ -1.57
CDC40P40968 GIT1YCR098C 1557 nt5.23□□□□□ -1.57
CDC40P40968 VPS5YOR069W 2028 nt5.23□□□□□ -1.57
CDC40P40968 LSG1YGL099W 1923 nt5.23□□□□□ -1.57
CDC40P40968 VBA1YMR088C 1689 nt5.22□□□□□ -1.57
CDC40P40968 THI2YBR240C 1353 nt5.22□□□□□ -1.57
CDC40P40968 SNF11YDR073W 510 nt5.22□□□□□ -1.57
CDC40P40968 YGR176WYGR176W 348 nt5.22□□□□□ -1.57
CDC40P40968 YLR312CYLR312C 1197 nt5.22□□□□□ -1.57
CDC40P40968 PIF1YML061C 2580 nt5.22□□□□□ -1.57
CDC40P40968 SPC97YHR172W 2472 nt5.22□□□□□ -1.57
CDC40P40968 NFS1YCL017C 1494 nt5.21□□□□□ -1.58
CDC40P40968 SQT1YIR012W 1296 nt5.21□□□□□ -1.58
CDC40P40968 HSP150YJL159W 1242 nt5.21□□□□□ -1.58
CDC40P40968 PAM17YKR065C 594 nt5.21□□□□□ -1.58
CDC40P40968 YLR123CYLR123C 330 nt5.21□□□□□ -1.58
CDC40P40968 ARA2YMR041C 1008 nt5.21□□□□□ -1.58
CDC40P40968 LAT1YNL071W 1449 nt5.21□□□□□ -1.58
CDC40P40968 YFL042CYFL042C 2025 nt5.21□□□□□ -1.58
CDC40P40968 CLB2YPR119W 1476 nt5.2□□□□□ -1.58
CDC40P40968 PTK2YJR059W 2457 nt5.2□□□□□ -1.58
CDC40P40968 CCC2YDR270W 3015 nt5.2□□□□□ -1.58
CDC40P40968 AMA1YGR225W 1782 nt5.2□□□□□ -1.58
CDC40P40968 RPR2YIR015W 435 nt5.2□□□□□ -1.58
CDC40P40968 RPL31BYLR406C 342 nt5.2□□□□□ -1.58
CDC40P40968 MRPL10YNL284C 969 nt5.2□□□□□ -1.58
CDC40P40968 PZF1YPR186C 1290 nt5.2□□□□□ -1.58
CDC40P40968 STT3YGL022W 2157 nt5.2□□□□□ -1.58
CDC40P40968 PRY3YJL078C 2646 nt5.2□□□□□ -1.58
CDC40P40968 MRPL1YDR116C 858 nt5.19□□□□□ -1.58
CDC40P40968 ADK2YER170W 678 nt5.19□□□□□ -1.58
CDC40P40968 DMA1YHR115C 1251 nt5.19□□□□□ -1.58
CDC40P40968 EFM3YJR129C 1020 nt5.19□□□□□ -1.58
CDC40P40968 SPG5YMR191W 1122 nt5.19□□□□□ -1.58
CDC40P40968 PRS4YBL068W 981 nt5.19□□□□□ -1.58
CDC40P40968 CTF19YPL018W 1110 nt5.19□□□□□ -1.58
CDC40P40968 PRP24YMR268C 1335 nt5.19□□□□□ -1.58
CDC40P40968 EDE1YBL047C 4146 nt5.19□□□□□ -1.58
CDC40P40968 NUD1YOR373W 2556 nt5.18□□□□□ -1.58
CDC40P40968 NUP1YOR098C 3231 nt5.18□□□□□ -1.58
CDC40P40968 URA7YBL039C 1740 nt5.18□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 56.8 ms