Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.98■■□□□ 1.27
PTPN6P29350 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.98■■□□□ 1.27
PTPN6P29350 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.97■■□□□ 1.27
PTPN6P29350 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTPN6P29350 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTPN6P29350 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTPN6P29350 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
PTPN6P29350 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTPN6P29350 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTPN6P29350 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.96■■□□□ 1.27
PTPN6P29350 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PTPN6P29350 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PTPN6P29350 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
PTPN6P29350 AC093323.1-202ENST00000635031 2045 ntBASIC22.95■■□□□ 1.26
PTPN6P29350 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.94■■□□□ 1.26
PTPN6P29350 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTPN6P29350 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTPN6P29350 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTPN6P29350 AC096887.2-201ENST00000623443 1957 ntBASIC22.94■■□□□ 1.26
PTPN6P29350 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.94■■□□□ 1.26
PTPN6P29350 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PTPN6P29350 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTPN6P29350 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTPN6P29350 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTPN6P29350 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTPN6P29350 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTPN6P29350 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.92■■□□□ 1.26
PTPN6P29350 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTPN6P29350 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTPN6P29350 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTPN6P29350 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.92■■□□□ 1.26
PTPN6P29350 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PTPN6P29350 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PTPN6P29350 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTPN6P29350 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.91■■□□□ 1.26
PTPN6P29350 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.91■■□□□ 1.26
PTPN6P29350 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTPN6P29350 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTPN6P29350 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTPN6P29350 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PTPN6P29350 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PTPN6P29350 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PTPN6P29350 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.9■■□□□ 1.26
PTPN6P29350 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
PTPN6P29350 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.9■■□□□ 1.26
PTPN6P29350 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
PTPN6P29350 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PTPN6P29350 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.89■■□□□ 1.26
PTPN6P29350 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
PTPN6P29350 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.89■■□□□ 1.26
PTPN6P29350 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.89■■□□□ 1.26
PTPN6P29350 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.26
PTPN6P29350 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
PTPN6P29350 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
PTPN6P29350 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PTPN6P29350 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PTPN6P29350 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.88■■□□□ 1.25
PTPN6P29350 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTPN6P29350 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTPN6P29350 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
PTPN6P29350 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTPN6P29350 AL359504.2-201ENST00000605506 1601 ntBASIC22.87■■□□□ 1.25
PTPN6P29350 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
PTPN6P29350 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTPN6P29350 HSD17B1P1-201ENST00000590052 955 ntBASIC22.87■■□□□ 1.25
PTPN6P29350 AL359258.2-201ENST00000564063 1566 ntBASIC22.87■■□□□ 1.25
PTPN6P29350 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PTPN6P29350 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.87■■□□□ 1.25
PTPN6P29350 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTPN6P29350 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PTPN6P29350 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTPN6P29350 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTPN6P29350 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTPN6P29350 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.86■■□□□ 1.25
PTPN6P29350 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTPN6P29350 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.86■■□□□ 1.25
PTPN6P29350 AC142381.3-201ENST00000568208 1670 ntBASIC22.86■■□□□ 1.25
PTPN6P29350 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
PTPN6P29350 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTPN6P29350 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
PTPN6P29350 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTPN6P29350 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTPN6P29350 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.85■■□□□ 1.25
PTPN6P29350 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC22.85■■□□□ 1.25
PTPN6P29350 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.84■■□□□ 1.25
PTPN6P29350 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PTPN6P29350 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTPN6P29350 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.84■■□□□ 1.25
PTPN6P29350 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTPN6P29350 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTPN6P29350 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTPN6P29350 AC022211.4-201ENST00000625094 2161 ntBASIC22.83■■□□□ 1.25
PTPN6P29350 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
PTPN6P29350 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.83■■□□□ 1.24
PTPN6P29350 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms