Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC33A1O00400 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC33A1O00400 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC33A1O00400 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC33A1O00400 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC33A1O00400 AC126177.7-201ENST00000547904 679 ntBASIC20.47■□□□□ 0.87
SLC33A1O00400 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC33A1O00400 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC33A1O00400 AL359504.2-201ENST00000605506 1601 ntBASIC20.46■□□□□ 0.87
SLC33A1O00400 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.46■□□□□ 0.87
SLC33A1O00400 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SLC33A1O00400 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SLC33A1O00400 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
SLC33A1O00400 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.45■□□□□ 0.87
SLC33A1O00400 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC33A1O00400 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
SLC33A1O00400 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SLC33A1O00400 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SLC33A1O00400 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC33A1O00400 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SLC33A1O00400 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC33A1O00400 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC33A1O00400 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC33A1O00400 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC33A1O00400 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC33A1O00400 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC33A1O00400 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC33A1O00400 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC33A1O00400 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC33A1O00400 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC33A1O00400 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC33A1O00400 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC33A1O00400 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC33A1O00400 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC33A1O00400 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC33A1O00400 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 ERN1-208ENST00000606895 2068 ntBASIC20.41■□□□□ 0.86
SLC33A1O00400 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC33A1O00400 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC33A1O00400 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC33A1O00400 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC33A1O00400 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC33A1O00400 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC33A1O00400 AC010501.1-201ENST00000606270 1962 ntBASIC20.39■□□□□ 0.86
SLC33A1O00400 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
SLC33A1O00400 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC33A1O00400 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SLC33A1O00400 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC33A1O00400 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC33A1O00400 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
SLC33A1O00400 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC33A1O00400 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC33A1O00400 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC33A1O00400 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC33A1O00400 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC33A1O00400 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC33A1O00400 MIR639-201ENST00000384974 98 ntBASIC20.37■□□□□ 0.85
SLC33A1O00400 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC33A1O00400 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC33A1O00400 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC33A1O00400 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC33A1O00400 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC33A1O00400 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC33A1O00400 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC33A1O00400 AC020928.2-201ENST00000588717 2197 ntBASIC20.35■□□□□ 0.85
SLC33A1O00400 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC33A1O00400 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms