Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TMEM129A0AVI4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 AC008813.1-201ENST00000536597 885 ntBASIC21.77■■□□□ 1.08
TMEM129A0AVI4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TMEM129A0AVI4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.76■■□□□ 1.07
TMEM129A0AVI4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TMEM129A0AVI4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 AL139125.2-201ENST00000623134 1869 ntBASIC21.74■■□□□ 1.07
TMEM129A0AVI4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 AC022211.4-201ENST00000625094 2161 ntBASIC21.74■■□□□ 1.07
TMEM129A0AVI4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TMEM129A0AVI4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TMEM129A0AVI4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 AC138932.3-201ENST00000567634 1902 ntBASIC21.72■■□□□ 1.07
TMEM129A0AVI4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TMEM129A0AVI4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.71■■□□□ 1.07
TMEM129A0AVI4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TMEM129A0AVI4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.7■■□□□ 1.06
TMEM129A0AVI4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TMEM129A0AVI4 HSD17B1P1-201ENST00000590052 955 ntBASIC21.68■■□□□ 1.06
TMEM129A0AVI4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TMEM129A0AVI4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TMEM129A0AVI4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM129A0AVI4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM129A0AVI4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TMEM129A0AVI4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms