Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 AC096887.2-201ENST00000623443 1957 ntBASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV8-1A0A0A6YYK1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV8-1A0A0A6YYK1 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV8-1A0A0A6YYK1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV8-1A0A0A6YYK1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC044849.2-201ENST00000606596 710 ntBASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC021231.2-201ENST00000594613 730 ntBASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV8-1A0A0A6YYK1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AL162393.1-201ENST00000437852 946 ntBASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV8-1A0A0A6YYK1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV8-1A0A0A6YYK1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV8-1A0A0A6YYK1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRAV8-1A0A0A6YYK1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TRAV8-1A0A0A6YYK1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV8-1A0A0A6YYK1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-1A0A0A6YYK1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV8-1A0A0A6YYK1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV8-1A0A0A6YYK1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV8-1A0A0A6YYK1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 DUX4L29-201ENST00000425409 679 ntBASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAV8-1A0A0A6YYK1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms