Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 RARRES2P9-201ENST00000565168 469 ntBASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 AL138918.1-201ENST00000568306 659 ntBASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 MIR4453-201ENST00000584019 89 ntBASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC28.31■■■□□ 2.12
BIVM-ERCC5R4GMW8 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 AL138688.1-201ENST00000624851 1594 ntBASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC009477.1-201ENST00000452936 217 ntBASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC093525.9-201ENST00000624961 1746 ntBASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
BIVM-ERCC5R4GMW8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 CECR7-204ENST00000609932 568 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 AL138828.2-201ENST00000615812 383 ntBASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC022144.1-201ENST00000602255 1580 ntBASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC28.29■■■□□ 2.12
BIVM-ERCC5R4GMW8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 FAM220BP-201ENST00000377689 816 ntBASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 COX5BP8-201ENST00000416911 349 ntBASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 AC025048.6-201ENST00000634326 1161 ntBASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BIVM-ERCC5R4GMW8 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 AL590560.3-201ENST00000623350 461 ntBASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
BIVM-ERCC5R4GMW8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
BIVM-ERCC5R4GMW8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 AL080243.2-201ENST00000418783 582 ntBASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC28.26■■■□□ 2.11
BIVM-ERCC5R4GMW8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms