Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 AL353135.1-201ENST00000606729 504 ntBASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RAI2Q9Y5P3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AC108860.2-201ENST00000562760 2183 ntBASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AC093909.1-201ENST00000504731 1122 ntBASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AL049840.3-201ENST00000602669 611 ntBASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 AC004706.3-202ENST00000621574 984 ntBASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 FAM215A-202ENST00000632077 792 ntBASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI2Q9Y5P3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 RPS2P28-201ENST00000314255 741 ntBASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 AC006557.2-201ENST00000592985 1240 ntBASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 AC106820.2-201ENST00000563775 3264 ntBASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAI2Q9Y5P3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RAI2Q9Y5P3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms