Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.7■□□□□ 0.26
CPNE7Q9UBL6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE7Q9UBL6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE7Q9UBL6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE7Q9UBL6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPNE7Q9UBL6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 DNAJB3-201ENST00000446806 729 ntBASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 PAWRP1-201ENST00000451083 565 ntBASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPNE7Q9UBL6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AC002310.6-201ENST00000624451 1377 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 UPF3AP3-201ENST00000420996 769 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AC096734.2-201ENST00000562054 433 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 MIR3687-2-201ENST00000577708 61 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AC010327.4-202ENST00000591484 748 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 MIR3687-1-201ENST00000614492 61 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 NOC2LP2-201ENST00000407594 1944 ntBASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPNE7Q9UBL6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 GPX1P2-201ENST00000429271 606 ntBASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 MTDHP5-201ENST00000598980 586 ntBASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 AC010507.1-201ENST00000633895 436 ntBASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 AC092865.6-201ENST00000642101 219 ntBASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPNE7Q9UBL6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms