Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NEUROD4Q9HD90 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 INTS4P1-201ENST00000438455 1935 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AP002383.4-201ENST00000442518 975 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AC114341.1-201ENST00000618070 349 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AC132938.5-201ENST00000624980 1813 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AL135999.2-201ENST00000622438 1686 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 AC011676.5-201ENST00000624864 2660 ntBASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEUROD4Q9HD90 NSUN5P1-202ENST00000421140 1535 ntBASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 NSUN5P2-203ENST00000457352 1529 ntBASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ATP5G2P1-201ENST00000433580 426 ntBASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 LINC00265-3P-201ENST00000447588 903 ntBASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 BNIP3P18-201ENST00000593976 575 ntBASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NEUROD4Q9HD90 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NEUROD4Q9HD90 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms