Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 AC093010.1-201ENST00000473625 1624 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 SPDYE18-201ENST00000510091 1050 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 BANF1P1-201ENST00000553684 263 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 WFDC1-204ENST00000613603 549 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 AC044860.1-202ENST00000559481 777 ntBASIC15.8■□□□□ 0.12
CHD8Q9HCK8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.8■□□□□ 0.12
CHD8Q9HCK8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 MTND6P24-201ENST00000440466 518 ntBASIC15.79■□□□□ 0.12
CHD8Q9HCK8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AL033527.5-201ENST00000641382 801 ntBASIC15.79■□□□□ 0.12
CHD8Q9HCK8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AC005412.3-201ENST00000580309 715 ntBASIC15.79■□□□□ 0.12
CHD8Q9HCK8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD8Q9HCK8 AC012569.1-201ENST00000591191 1524 ntBASIC15.78■□□□□ 0.12
CHD8Q9HCK8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 KRT43P-201ENST00000434019 910 ntBASIC15.78■□□□□ 0.12
CHD8Q9HCK8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 AFG3L1P-217ENST00000557444 2447 ntBASIC15.78■□□□□ 0.12
CHD8Q9HCK8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD8Q9HCK8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 BX276092.7-203ENST00000637198 1536 ntBASIC15.77■□□□□ 0.12
CHD8Q9HCK8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CHD8Q9HCK8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms