Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 STK19B-204ENST00000512515 211 ntBASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 AC092171.3-201ENST00000610122 2651 ntBASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPF3BQ9BZI7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 PKD1P1-201ENST00000458669 6805 ntBASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 AC074051.2-201ENST00000565115 352 ntBASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 NPAP1P7-201ENST00000613027 823 ntBASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 AC073592.5-201ENST00000624854 528 ntBASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPF3BQ9BZI7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UPF3BQ9BZI7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 TNRC18P3-201ENST00000441896 2691 ntBASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 KLF4P1-201ENST00000412782 1185 ntBASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 EGFEM1P-202ENST00000431685 1563 ntBASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
UPF3BQ9BZI7 AC148477.5-201ENST00000625164 1645 ntBASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 AL118508.1-201ENST00000613502 2345 ntBASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 AP000867.3-201ENST00000524675 377 ntBASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 AC092119.3-201ENST00000612618 583 ntBASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UPF3BQ9BZI7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms