Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPAP1Q9BWH6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 HMGN1P19-201ENST00000436976 333 ntBASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 KRT18P2-201ENST00000447938 1258 ntBASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 ALG1L5P-201ENST00000482043 771 ntBASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 AL805961.1-202ENST00000641562 540 ntBASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 AD000864.1-201ENST00000624076 2295 ntBASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.88■□□□□ 0.93
RPAP1Q9BWH6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 SIGLEC30P-201ENST00000455569 941 ntBASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPAP1Q9BWH6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 HCG4B-203ENST00000450128 991 ntBASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPAP1Q9BWH6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AC211486.1-202ENST00000416371 468 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 PRSS29P-201ENST00000440800 595 ntBASIC20.85■□□□□ 0.93
RPAP1Q9BWH6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms