Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
VRK1Q99986 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
VRK1Q99986 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
VRK1Q99986 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
VRK1Q99986 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 TP73-AS1-210ENST00000637775 1455 ntBASIC15.28■□□□□ 0.04
VRK1Q99986 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 AC009533.2-201ENST00000543664 586 ntBASIC15.28■□□□□ 0.04
VRK1Q99986 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.28■□□□□ 0.04
VRK1Q99986 AC005336.2-201ENST00000593183 939 ntBASIC15.28■□□□□ 0.04
VRK1Q99986 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.28■□□□□ 0.04
VRK1Q99986 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 AC114341.1-201ENST00000618070 349 ntBASIC15.28■□□□□ 0.04
VRK1Q99986 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.28■□□□□ 0.04
VRK1Q99986 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
VRK1Q99986 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
VRK1Q99986 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VRK1Q99986 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 AL162727.3-201ENST00000635661 2787 ntBASIC15.27■□□□□ 0.04
VRK1Q99986 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.27■□□□□ 0.04
VRK1Q99986 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
VRK1Q99986 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
VRK1Q99986 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 RCN1P2-201ENST00000398357 915 ntBASIC15.27■□□□□ 0.04
VRK1Q99986 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK1Q99986 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.27■□□□□ 0.04
VRK1Q99986 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.27■□□□□ 0.04
VRK1Q99986 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
VRK1Q99986 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.27■□□□□ 0.04
VRK1Q99986 REXO1L6P-202ENST00000619970 1078 ntBASIC15.27■□□□□ 0.04
VRK1Q99986 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.27■□□□□ 0.04
VRK1Q99986 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
VRK1Q99986 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.27■□□□□ 0.03
VRK1Q99986 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
VRK1Q99986 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.27■□□□□ 0.03
VRK1Q99986 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.27■□□□□ 0.03
VRK1Q99986 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms