Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ARID3AQ99856 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.7■□□□□ 0.74
ARID3AQ99856 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ARID3AQ99856 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ARID3AQ99856 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ARID3AQ99856 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARID3AQ99856 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
ARID3AQ99856 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.7■□□□□ 0.74
ARID3AQ99856 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARID3AQ99856 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC19.69■□□□□ 0.74
ARID3AQ99856 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
ARID3AQ99856 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 AC093677.2-201ENST00000600169 1863 ntBASIC19.69■□□□□ 0.74
ARID3AQ99856 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.69■□□□□ 0.74
ARID3AQ99856 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARID3AQ99856 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
ARID3AQ99856 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
ARID3AQ99856 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 AC106886.4-201ENST00000623557 2502 ntBASIC19.69■□□□□ 0.74
ARID3AQ99856 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARID3AQ99856 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
ARID3AQ99856 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARID3AQ99856 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.68■□□□□ 0.74
ARID3AQ99856 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ARID3AQ99856 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.68■□□□□ 0.74
ARID3AQ99856 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 AK4P3-201ENST00000418260 669 ntBASIC19.68■□□□□ 0.74
ARID3AQ99856 KRT18P38-201ENST00000449496 1282 ntBASIC19.68■□□□□ 0.74
ARID3AQ99856 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.68■□□□□ 0.74
ARID3AQ99856 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.68■□□□□ 0.74
ARID3AQ99856 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.68■□□□□ 0.74
ARID3AQ99856 MIR3180-4-201ENST00000582223 153 ntBASIC19.68■□□□□ 0.74
ARID3AQ99856 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.68■□□□□ 0.74
ARID3AQ99856 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ARID3AQ99856 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.68■□□□□ 0.74
ARID3AQ99856 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.68■□□□□ 0.74
ARID3AQ99856 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ARID3AQ99856 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
ARID3AQ99856 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARID3AQ99856 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.67■□□□□ 0.74
ARID3AQ99856 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms