Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AC096582.2-201ENST00000510860 516 ntBASIC16.05■□□□□ 0.16
TM9SF2Q99805 AC009533.2-201ENST00000543664 586 ntBASIC16.05■□□□□ 0.16
TM9SF2Q99805 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF2Q99805 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 AC114341.1-201ENST00000618070 349 ntBASIC16.04■□□□□ 0.16
TM9SF2Q99805 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF2Q99805 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TM9SF2Q99805 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TM9SF2Q99805 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TM9SF2Q99805 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TM9SF2Q99805 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TM9SF2Q99805 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms