Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 CYP2A7P1-201ENST00000595391 815 ntBASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 AL021920.2-201ENST00000624828 1351 ntBASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK5RAP2Q96SN8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 KRT8P49-201ENST00000604166 1432 ntBASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AL645939.2-201ENST00000427340 991 ntBASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC108860.2-201ENST00000562760 2183 ntBASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 FAM58DP-201ENST00000428076 619 ntBASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CDK5RAP2Q96SN8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 LINC00895-201ENST00000629028 1637 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AC002056.1-201ENST00000395613 760 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 PMS2P4-201ENST00000412466 1052 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AC069335.1-201ENST00000489972 472 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AC087641.1-201ENST00000557561 1021 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AC079781.4-201ENST00000641908 219 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 AL645608.8-201ENST00000606034 2086 ntBASIC20.04■□□□□ 0.8
CDK5RAP2Q96SN8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDK5RAP2Q96SN8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms