Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 PKD1P1-201ENST00000458669 6805 ntBASIC14.33□□□□□ -0.12
GAFA1Q96PS6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GAFA1Q96PS6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AC073621.1-201ENST00000392730 636 ntBASIC14.32□□□□□ -0.12
GAFA1Q96PS6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AL662844.1-201ENST00000546340 181 ntBASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AC012640.2-201ENST00000561606 901 ntBASIC14.32□□□□□ -0.12
GAFA1Q96PS6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 MIR7706-201ENST00000613747 67 ntBASIC14.32□□□□□ -0.12
GAFA1Q96PS6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GAFA1Q96PS6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 AC092053.1-201ENST00000605787 1936 ntBASIC14.31□□□□□ -0.12
GAFA1Q96PS6 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 RNA5SP419-201ENST00000515908 135 ntBASIC14.31□□□□□ -0.12
GAFA1Q96PS6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 AC105339.3-201ENST00000560043 636 ntBASIC14.31□□□□□ -0.12
GAFA1Q96PS6 AL049840.3-201ENST00000602669 611 ntBASIC14.31□□□□□ -0.12
GAFA1Q96PS6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 AP002414.3-201ENST00000589352 1468 ntBASIC14.31□□□□□ -0.12
GAFA1Q96PS6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.31□□□□□ -0.12
GAFA1Q96PS6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms