Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PGBD1Q96JS3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 AC105020.1-201ENST00000435356 2205 ntBASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 FDX1P1-201ENST00000449115 551 ntBASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 AC021087.4-201ENST00000563761 564 ntBASIC20.03■□□□□ 0.8
PGBD1Q96JS3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 AL356309.3-201ENST00000624132 1934 ntBASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PGBD1Q96JS3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 AC092053.1-201ENST00000605787 1936 ntBASIC20.02■□□□□ 0.8
PGBD1Q96JS3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 AC005915.1-201ENST00000624912 2018 ntBASIC20.02■□□□□ 0.8
PGBD1Q96JS3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PGBD1Q96JS3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 AC079776.2-201ENST00000641154 1609 ntBASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PGBD1Q96JS3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.01■□□□□ 0.79
PGBD1Q96JS3 KLF4P1-201ENST00000412782 1185 ntBASIC20.01■□□□□ 0.79
PGBD1Q96JS3 SPDYE21P-201ENST00000413323 827 ntBASIC20.01■□□□□ 0.79
PGBD1Q96JS3 HNRNPDP1-201ENST00000439535 754 ntBASIC20.01■□□□□ 0.79
PGBD1Q96JS3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.01■□□□□ 0.79
PGBD1Q96JS3 STK25P1-201ENST00000585406 838 ntBASIC20.01■□□□□ 0.79
PGBD1Q96JS3 AL049840.3-201ENST00000602669 611 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms