Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHDQ96IW2 KRT17P7-201ENST00000451704 1104 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 RN7SL692P-201ENST00000464677 288 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.27■□□□□ 0.36
SHDQ96IW2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.27■□□□□ 0.36
SHDQ96IW2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHDQ96IW2 AC027369.6-201ENST00000525520 931 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.27■□□□□ 0.36
SHDQ96IW2 AP000842.3-202ENST00000569238 1080 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.27■□□□□ 0.36
SHDQ96IW2 AC027307.2-201ENST00000591252 911 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 AC073592.8-201ENST00000624126 511 ntBASIC17.27■□□□□ 0.36
SHDQ96IW2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SHDQ96IW2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.27■□□□□ 0.36
SHDQ96IW2 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SHDQ96IW2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.27■□□□□ 0.35
SHDQ96IW2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHDQ96IW2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.27■□□□□ 0.35
SHDQ96IW2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHDQ96IW2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SHDQ96IW2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHDQ96IW2 AP000997.3-201ENST00000623333 2250 ntBASIC17.27■□□□□ 0.35
SHDQ96IW2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
SHDQ96IW2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHDQ96IW2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SHDQ96IW2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.26■□□□□ 0.35
SHDQ96IW2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 MIR346-201ENST00000362234 95 ntBASIC17.26■□□□□ 0.35
SHDQ96IW2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SHDQ96IW2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.26■□□□□ 0.35
SHDQ96IW2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.26■□□□□ 0.35
SHDQ96IW2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.26■□□□□ 0.35
SHDQ96IW2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 MIR4453-201ENST00000584019 89 ntBASIC17.26■□□□□ 0.35
SHDQ96IW2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SHDQ96IW2 HTR7P1-202ENST00000624664 4411 ntBASIC17.26■□□□□ 0.35
SHDQ96IW2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.26■□□□□ 0.35
SHDQ96IW2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHDQ96IW2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHDQ96IW2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.25■□□□□ 0.35
SHDQ96IW2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.25■□□□□ 0.35
SHDQ96IW2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.25■□□□□ 0.35
SHDQ96IW2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.25■□□□□ 0.35
SHDQ96IW2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SHDQ96IW2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.25■□□□□ 0.35
SHDQ96IW2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.25■□□□□ 0.35
SHDQ96IW2 HLA-V-201ENST00000429037 534 ntBASIC17.25■□□□□ 0.35
SHDQ96IW2 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.25■□□□□ 0.35
SHDQ96IW2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SHDQ96IW2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.25■□□□□ 0.35
SHDQ96IW2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.25■□□□□ 0.35
SHDQ96IW2 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
SHDQ96IW2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.25■□□□□ 0.35
SHDQ96IW2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.25■□□□□ 0.35
SHDQ96IW2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.25■□□□□ 0.35
SHDQ96IW2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SHDQ96IW2 LINC01451-201ENST00000623792 534 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms