Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 RNA5SP415-201ENST00000517246 115 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 IGHV3-52-201ENST00000519770 353 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC145285.3-201ENST00000564603 959 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC006557.2-201ENST00000592985 1240 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AC148477.5-201ENST00000625164 1645 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 BICD1-207ENST00000551848 1962 ntBASIC13.48□□□□□ -0.25
RAX2Q96IS3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
RAX2Q96IS3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAX2Q96IS3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 TERC-201ENST00000602385 541 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 AL356488.2-201ENST00000602755 427 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 AL589182.2-201ENST00000619332 1049 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 MIR1199-201ENST00000621445 119 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 AC117500.6-201ENST00000624871 588 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 AC138028.4-201ENST00000564984 1845 ntBASIC13.47□□□□□ -0.25
RAX2Q96IS3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAX2Q96IS3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC13.47□□□□□ -0.25
RAX2Q96IS3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAX2Q96IS3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.46□□□□□ -0.25
RAX2Q96IS3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAX2Q96IS3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RAX2Q96IS3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RAX2Q96IS3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAX2Q96IS3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms