Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AC092068.3-201ENST00000587894 2016 ntBASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AC005915.1-201ENST00000624912 2018 ntBASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 MIR3652-201ENST00000579335 131 ntBASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 GPR89P-201ENST00000407924 1495 ntBASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RHBDF1Q96CC6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AC106795.1-205ENST00000512851 1056 ntBASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RHBDF1Q96CC6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 AC097637.2-201ENST00000624096 1997 ntBASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 AL732292.2-201ENST00000609649 430 ntBASIC16.77■□□□□ 0.28
RHBDF1Q96CC6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RHBDF1Q96CC6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 AL118508.1-201ENST00000613502 2345 ntBASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RHBDF1Q96CC6 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms