Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM43Q96BQ3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM43Q96BQ3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM43Q96BQ3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM43Q96BQ3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AL353732.1-201ENST00000569618 1459 ntBASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AC009477.1-201ENST00000452936 217 ntBASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 RARRES2P9-201ENST00000565168 469 ntBASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AL031055.1-201ENST00000606362 631 ntBASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 AC016027.1-202ENST00000607927 1699 ntBASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM43Q96BQ3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM43Q96BQ3 AC007541.1-201ENST00000570282 1469 ntBASIC18.52■□□□□ 0.55
TRIM43Q96BQ3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AL132655.2-201ENST00000596276 594 ntBASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 AC008738.7-201ENST00000609744 511 ntBASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 IGHV3-72-202ENST00000621503 303 ntBASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM43Q96BQ3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AC142381.1-201ENST00000426099 345 ntBASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 GIMAP3P-201ENST00000495150 836 ntBASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AC007967.4-201ENST00000614700 386 ntBASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AP3S2-216ENST00000617003 1561 ntBASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM43Q96BQ3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms