Protein–RNA interactions for Protein: Q96B67

ARRDC3, Arrestin domain-containing protein 3, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3Q96B67 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 HTR5BP-201ENST00000430851 1154 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 AC004967.1-201ENST00000453589 447 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 MIR4469-201ENST00000583919 79 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 REXO1L3P-201ENST00000622202 1288 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 AC129492.6-201ENST00000611383 1305 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 AC116353.5-201ENST00000638148 1699 ntBASIC17.13■□□□□ 0.33
ARRDC3Q96B67 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ARRDC3Q96B67 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AC211486.1-202ENST00000416371 468 ntBASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AC211476.1-201ENST00000503899 468 ntBASIC17.12■□□□□ 0.33
ARRDC3Q96B67 YBX1P5-201ENST00000509441 847 ntBASIC17.12■□□□□ 0.33
ARRDC3Q96B67 HCG11-201ENST00000411553 5696 ntBASIC17.12■□□□□ 0.33
ARRDC3Q96B67 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ARRDC3Q96B67 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 HTR7P1-202ENST00000624664 4411 ntBASIC17.11■□□□□ 0.33
ARRDC3Q96B67 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ARRDC3Q96B67 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 FAM58CP-201ENST00000435741 640 ntBASIC17.1■□□□□ 0.33
ARRDC3Q96B67 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 AP001160.2-201ENST00000596071 487 ntBASIC17.1■□□□□ 0.33
ARRDC3Q96B67 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ARRDC3Q96B67 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms