Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.16■□□□□ 0.02
TMEM54Q969K7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 AC004870.1-201ENST00000315132 882 ntBASIC15.16■□□□□ 0.02
TMEM54Q969K7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 RNPS1P1-201ENST00000507437 918 ntBASIC15.16■□□□□ 0.02
TMEM54Q969K7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.16■□□□□ 0.02
TMEM54Q969K7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TMEM54Q969K7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 AD000864.1-201ENST00000624076 2295 ntBASIC15.15■□□□□ 0.02
TMEM54Q969K7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 FAM197Y8-203ENST00000450145 560 ntBASIC15.15■□□□□ 0.02
TMEM54Q969K7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 AC006557.2-201ENST00000592985 1240 ntBASIC15.15■□□□□ 0.02
TMEM54Q969K7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TMEM54Q969K7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TMEM54Q969K7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.14■□□□□ 0.01
TMEM54Q969K7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM54Q969K7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM54Q969K7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TMEM54Q969K7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TMEM54Q969K7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM54Q969K7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM54Q969K7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TMEM54Q969K7 AC092068.3-201ENST00000587894 2016 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms