Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 AC004233.3-201ENST00000607794 1269 ntBASIC20.9■□□□□ 0.94
CNKSR1Q969H4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.9■□□□□ 0.94
CNKSR1Q969H4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNKSR1Q969H4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 HLA-V-201ENST00000429037 534 ntBASIC20.89■□□□□ 0.93
CNKSR1Q969H4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNKSR1Q969H4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC20.88■□□□□ 0.93
CNKSR1Q969H4 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.88■□□□□ 0.93
CNKSR1Q969H4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 AC022144.1-201ENST00000602255 1580 ntBASIC20.88■□□□□ 0.93
CNKSR1Q969H4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNKSR1Q969H4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 AC018529.1-201ENST00000613063 361 ntBASIC20.87■□□□□ 0.93
CNKSR1Q969H4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNKSR1Q969H4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms