Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6NLQ92738 SPDYE14P-201ENST00000442619 822 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 AC005225.4-201ENST00000557330 545 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 AC026150.2-201ENST00000564693 1156 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 AC140878.1-201ENST00000565277 250 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.41■□□□□ 0.7
USP6NLQ92738 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 AL161645.1-201ENST00000622716 1255 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 FO538757.1-201ENST00000623083 1397 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
USP6NLQ92738 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP6NLQ92738 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.41■□□□□ 0.7
USP6NLQ92738 FLJ13224-201ENST00000313737 1514 ntBASIC19.41■□□□□ 0.7
USP6NLQ92738 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.4■□□□□ 0.7
USP6NLQ92738 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.4■□□□□ 0.7
USP6NLQ92738 KRT8P23-201ENST00000560090 1207 ntBASIC19.4■□□□□ 0.7
USP6NLQ92738 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.4■□□□□ 0.7
USP6NLQ92738 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 AC012645.4-201ENST00000610691 1061 ntBASIC19.4■□□□□ 0.7
USP6NLQ92738 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.4■□□□□ 0.7
USP6NLQ92738 AC008677.1-201ENST00000519230 1561 ntBASIC19.4■□□□□ 0.7
USP6NLQ92738 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.4■□□□□ 0.7
USP6NLQ92738 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP6NLQ92738 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
USP6NLQ92738 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP6NLQ92738 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.39■□□□□ 0.7
USP6NLQ92738 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
USP6NLQ92738 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.39■□□□□ 0.7
USP6NLQ92738 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP6NLQ92738 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP6NLQ92738 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
USP6NLQ92738 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.39■□□□□ 0.69
USP6NLQ92738 FAM207CP-201ENST00000443486 507 ntBASIC19.39■□□□□ 0.69
USP6NLQ92738 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.39■□□□□ 0.69
USP6NLQ92738 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP6NLQ92738 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP6NLQ92738 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms