Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TM9SF4Q92544 AC005593.1-201ENST00000624894 515 ntBASIC16.32■□□□□ 0.2
TM9SF4Q92544 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TM9SF4Q92544 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC079776.2-201ENST00000641154 1609 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC096633.1-201ENST00000422446 749 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC005104.2-201ENST00000427818 678 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC034105.1-201ENST00000563488 319 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 AP001094.4-201ENST00000579008 2176 ntBASIC16.31■□□□□ 0.2
TM9SF4Q92544 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TM9SF4Q92544 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TM9SF4Q92544 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 AC092183.1-201ENST00000469884 875 ntBASIC16.3■□□□□ 0.2
TM9SF4Q92544 AL691403.2-201ENST00000618460 490 ntBASIC16.3■□□□□ 0.2
TM9SF4Q92544 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TM9SF4Q92544 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.3■□□□□ 0.2
TM9SF4Q92544 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TM9SF4Q92544 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.29■□□□□ 0.2
TM9SF4Q92544 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms