Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 AL662844.1-201ENST00000546340 181 ntBASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 AC124947.2-201ENST00000547118 1133 ntBASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 SLC25A6P4-201ENST00000586535 553 ntBASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 AC105020.1-201ENST00000435356 2205 ntBASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMARCC2Q8TAQ2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AF186996.4-201ENST00000467186 377 ntBASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AC073648.2-201ENST00000510116 352 ntBASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AC064862.7-201ENST00000604520 867 ntBASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.18■□□□□ 0.82
SMARCC2Q8TAQ2 AL356309.3-201ENST00000624132 1934 ntBASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 KLF4P1-201ENST00000412782 1185 ntBASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.17■□□□□ 0.82
SMARCC2Q8TAQ2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SMARCC2Q8TAQ2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms