Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 OR7E14P-202ENST00000530490 1290 ntBASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 AC006557.2-201ENST00000592985 1240 ntBASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 AL353135.1-201ENST00000606729 504 ntBASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 EGFEM1P-202ENST00000431685 1563 ntBASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC148Q8NFR7 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC148Q8NFR7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 RPS2P1-201ENST00000434010 821 ntBASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 AL773604.1-201ENST00000617417 272 ntBASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 AC004706.3-202ENST00000621574 984 ntBASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC148Q8NFR7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 RPS2P28-201ENST00000314255 741 ntBASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CCDC148Q8NFR7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms