Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 LINC00982-205ENST00000420957 435 ntBASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 NCF1C-201ENST00000438382 1427 ntBASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 EMBP1-201ENST00000458200 901 ntBASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 LINC02012-201ENST00000608206 1725 ntBASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ATPAF2Q8N5M1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 AC004870.1-201ENST00000315132 882 ntBASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 KRT126P-201ENST00000549467 1181 ntBASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 MTDHP4-201ENST00000600287 670 ntBASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ATPAF2Q8N5M1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATPAF2Q8N5M1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms