Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 KRT17P8-201ENST00000540749 863 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AC138028.4-201ENST00000564984 1845 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 AL138781.2-201ENST00000617896 1843 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 NEFHP1-201ENST00000412845 2629 ntBASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
VPS13BQ7Z7G8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC112492.5-201ENST00000421897 457 ntBASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 API5-211ENST00000534695 560 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC100757.3-201ENST00000622361 1406 ntBASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AL671277.1-201ENST00000429656 993 ntBASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 AC046185.3-201ENST00000623228 1824 ntBASIC10.51□□□□□ -0.73
VPS13BQ7Z7G8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 MIR6805-201ENST00000615055 62 ntBASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 SPDYE12P-201ENST00000618416 771 ntBASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.5□□□□□ -0.73
VPS13BQ7Z7G8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms