Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AC116353.5-201ENST00000638148 1699 ntBASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.34■□□□□ 0.37
LYSMD3Q7Z3D4 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LYSMD3Q7Z3D4 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 NCF1C-201ENST00000438382 1427 ntBASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 HNRNPDP1-201ENST00000439535 754 ntBASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LYSMD3Q7Z3D4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ACTG1P4-201ENST00000425123 1122 ntBASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 OR7E14P-202ENST00000530490 1290 ntBASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 AL589182.2-201ENST00000619332 1049 ntBASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LYSMD3Q7Z3D4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 AC093525.9-201ENST00000624961 1746 ntBASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LYSMD3Q7Z3D4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms