Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AC092053.1-201ENST00000605787 1936 ntBASIC20.59■□□□□ 0.89
RNF20Q5VTR2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 GPR89P-201ENST00000407924 1495 ntBASIC20.59■□□□□ 0.89
RNF20Q5VTR2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AC106795.1-205ENST00000512851 1056 ntBASIC20.59■□□□□ 0.89
RNF20Q5VTR2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AP001269.4-201ENST00000609611 512 ntBASIC20.59■□□□□ 0.89
RNF20Q5VTR2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF20Q5VTR2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 RBM17P3-201ENST00000417687 1192 ntBASIC20.58■□□□□ 0.89
RNF20Q5VTR2 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 PRELID1P1-202ENST00000567272 903 ntBASIC20.58■□□□□ 0.89
RNF20Q5VTR2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF20Q5VTR2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 AC009053.2-201ENST00000563701 2365 ntBASIC20.58■□□□□ 0.88
RNF20Q5VTR2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
RNF20Q5VTR2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 AC097637.2-201ENST00000624096 1997 ntBASIC20.57■□□□□ 0.88
RNF20Q5VTR2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 KRT18P31-201ENST00000506277 1292 ntBASIC20.57■□□□□ 0.88
RNF20Q5VTR2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 AL732292.2-201ENST00000609649 430 ntBASIC20.57■□□□□ 0.88
RNF20Q5VTR2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF20Q5VTR2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF20Q5VTR2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms