Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 AC034232.1-201ENST00000506026 1064 ntBASIC16.67■□□□□ 0.26
RNF220Q5VTB9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF220Q5VTB9 AC099063.4-201ENST00000641099 1602 ntBASIC16.67■□□□□ 0.26
RNF220Q5VTB9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 AC132938.6-201ENST00000623828 1655 ntBASIC16.66■□□□□ 0.26
RNF220Q5VTB9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
RNF220Q5VTB9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AC005915.1-201ENST00000624912 2018 ntBASIC16.65■□□□□ 0.26
RNF220Q5VTB9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 GCSHP2-201ENST00000560971 527 ntBASIC16.65■□□□□ 0.26
RNF220Q5VTB9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AC092171.3-201ENST00000610122 2651 ntBASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF220Q5VTB9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
RNF220Q5VTB9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.26
RNF220Q5VTB9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RNF220Q5VTB9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms