Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.2■□□□□ 0.5
VARS2Q5ST30 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VARS2Q5ST30 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC090142.2-201ENST00000483263 416 ntBASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC107918.2-201ENST00000530817 355 ntBASIC18.19■□□□□ 0.5
VARS2Q5ST30 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.19■□□□□ 0.5
VARS2Q5ST30 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VARS2Q5ST30 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 CNN2P11-201ENST00000429351 262 ntBASIC18.18■□□□□ 0.5
VARS2Q5ST30 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 AC092919.2-201ENST00000623631 1645 ntBASIC18.18■□□□□ 0.5
VARS2Q5ST30 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
VARS2Q5ST30 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VARS2Q5ST30 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 FAM8A3P-201ENST00000427218 844 ntBASIC18.17■□□□□ 0.5
VARS2Q5ST30 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 ACTG1P14-201ENST00000446382 1122 ntBASIC18.17■□□□□ 0.5
VARS2Q5ST30 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 RFPL4AP1-201ENST00000530883 850 ntBASIC18.17■□□□□ 0.5
VARS2Q5ST30 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 AC092902.6-201ENST00000641783 218 ntBASIC18.17■□□□□ 0.5
VARS2Q5ST30 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
VARS2Q5ST30 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VARS2Q5ST30 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms