Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP1Q04837 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.6□□□□□ -0.07
SSBP1Q04837 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.6□□□□□ -0.07
SSBP1Q04837 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.6□□□□□ -0.07
SSBP1Q04837 HLA-J-202ENST00000469281 1241 ntBASIC14.6□□□□□ -0.07
SSBP1Q04837 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.6□□□□□ -0.07
SSBP1Q04837 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP1Q04837 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP1Q04837 AL391256.1-201ENST00000443260 1855 ntBASIC14.6□□□□□ -0.07
SSBP1Q04837 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.6□□□□□ -0.07
SSBP1Q04837 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.6□□□□□ -0.07
SSBP1Q04837 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSBP1Q04837 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SSBP1Q04837 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.59□□□□□ -0.07
SSBP1Q04837 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
SSBP1Q04837 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 ABHD17AP1-201ENST00000358206 933 ntBASIC14.59□□□□□ -0.07
SSBP1Q04837 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 RPS2P55-201ENST00000397318 883 ntBASIC14.59□□□□□ -0.07
SSBP1Q04837 AP000523.1-201ENST00000398242 1049 ntBASIC14.59□□□□□ -0.07
SSBP1Q04837 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.59□□□□□ -0.07
SSBP1Q04837 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 MMD2-204ENST00000612910 778 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 ME2P1-201ENST00000426028 1970 ntBASIC14.59□□□□□ -0.07
SSBP1Q04837 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.59□□□□□ -0.07
SSBP1Q04837 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSBP1Q04837 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
SSBP1Q04837 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP1Q04837 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
SSBP1Q04837 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP1Q04837 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.58□□□□□ -0.07
SSBP1Q04837 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSBP1Q04837 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.58□□□□□ -0.07
SSBP1Q04837 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.58□□□□□ -0.08
SSBP1Q04837 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSBP1Q04837 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.58□□□□□ -0.08
SSBP1Q04837 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms