Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEP78395 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEP78395 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEP78395 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PRAMEP78395 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEP78395 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEP78395 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEP78395 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 AC009336.1-201ENST00000608941 1553 ntBASIC17.42■□□□□ 0.38
PRAMEP78395 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEP78395 NUS1P2-201ENST00000417358 873 ntBASIC17.42■□□□□ 0.38
PRAMEP78395 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEP78395 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEP78395 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 AD001527.2-201ENST00000622994 785 ntBASIC17.42■□□□□ 0.38
PRAMEP78395 AC073592.5-201ENST00000624854 528 ntBASIC17.42■□□□□ 0.38
PRAMEP78395 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEP78395 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEP78395 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEP78395 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEP78395 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PRAMEP78395 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 AC093525.9-201ENST00000624961 1746 ntBASIC17.41■□□□□ 0.38
PRAMEP78395 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
PRAMEP78395 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEP78395 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PRAMEP78395 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEP78395 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEP78395 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.41■□□□□ 0.38
PRAMEP78395 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 AC132938.5-201ENST00000624980 1813 ntBASIC17.41■□□□□ 0.38
PRAMEP78395 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.41■□□□□ 0.38
PRAMEP78395 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PRAMEP78395 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.41■□□□□ 0.38
PRAMEP78395 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PRAMEP78395 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.4■□□□□ 0.38
PRAMEP78395 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PRAMEP78395 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms