Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXG1P55316 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.1■□□□□ 0.01
FOXG1P55316 IGHV3-65-201ENST00000523210 341 ntBASIC15.1■□□□□ 0.01
FOXG1P55316 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 AC008667.4-201ENST00000607370 168 ntBASIC15.1■□□□□ 0.01
FOXG1P55316 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
FOXG1P55316 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
FOXG1P55316 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.1■□□□□ 0.01
FOXG1P55316 LETM1P2-201ENST00000597330 2178 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 AC092053.1-201ENST00000605787 1936 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
FOXG1P55316 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 MIR940-201ENST00000401276 94 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 AC007967.2-201ENST00000432613 625 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.09■□□□□ 0.01
FOXG1P55316 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PGM5P2-202ENST00000637225 1043 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.09■□□□□ 0.01
FOXG1P55316 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.09■□□□□ 0.01
FOXG1P55316 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
FOXG1P55316 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
FOXG1P55316 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXG1P55316 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
FOXG1P55316 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXG1P55316 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXG1P55316 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
FOXG1P55316 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
FOXG1P55316 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 EGFEM1P-202ENST00000431685 1563 ntBASIC15.08■□□□□ 0
FOXG1P55316 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 AL023806.1-201ENST00000603994 1649 ntBASIC15.08■□□□□ 0
FOXG1P55316 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
FOXG1P55316 AP002414.1-201ENST00000391405 1147 ntBASIC15.08■□□□□ 0
FOXG1P55316 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 POLD2P1-201ENST00000511220 997 ntBASIC15.08■□□□□ 0
FOXG1P55316 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.08■□□□□ 0
FOXG1P55316 TERC-201ENST00000602385 541 ntBASIC15.08■□□□□ 0
FOXG1P55316 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
FOXG1P55316 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
FOXG1P55316 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.08■□□□□ 0
FOXG1P55316 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.08■□□□□ 0
FOXG1P55316 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.08■□□□□ 0
FOXG1P55316 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
FOXG1P55316 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC15.08■□□□□ 0
FOXG1P55316 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms