Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.97■□□□□ 0.63
PMS1P54277 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.97■□□□□ 0.63
PMS1P54277 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.97■□□□□ 0.63
PMS1P54277 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 AC093458.2-201ENST00000623150 629 ntBASIC18.97■□□□□ 0.63
PMS1P54277 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.97■□□□□ 0.63
PMS1P54277 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
PMS1P54277 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.97■□□□□ 0.63
PMS1P54277 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PMS1P54277 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
PMS1P54277 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 MIR1224-201ENST00000408193 85 ntBASIC18.96■□□□□ 0.63
PMS1P54277 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PMS1P54277 AL020989.1-201ENST00000422979 469 ntBASIC18.96■□□□□ 0.63
PMS1P54277 ABCD1P5-201ENST00000445663 754 ntBASIC18.96■□□□□ 0.63
PMS1P54277 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.96■□□□□ 0.63
PMS1P54277 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.96■□□□□ 0.63
PMS1P54277 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PMS1P54277 GPR89P-201ENST00000407924 1495 ntBASIC18.96■□□□□ 0.63
PMS1P54277 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PMS1P54277 PCDHB17P-201ENST00000539533 2393 ntBASIC18.96■□□□□ 0.63
PMS1P54277 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PMS1P54277 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PMS1P54277 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.95■□□□□ 0.62
PMS1P54277 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.95■□□□□ 0.62
PMS1P54277 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
PMS1P54277 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.95■□□□□ 0.62
PMS1P54277 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.95■□□□□ 0.62
PMS1P54277 AC138894.3-201ENST00000603787 634 ntBASIC18.95■□□□□ 0.62
PMS1P54277 AP001269.4-201ENST00000609611 512 ntBASIC18.95■□□□□ 0.62
PMS1P54277 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PMS1P54277 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.95■□□□□ 0.62
PMS1P54277 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.95■□□□□ 0.62
PMS1P54277 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
PMS1P54277 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PMS1P54277 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.95■□□□□ 0.62
PMS1P54277 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.94■□□□□ 0.62
PMS1P54277 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms