Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.4■□□□□ 0.38
LIMK2P53671 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.4■□□□□ 0.38
LIMK2P53671 AC109462.3-201ENST00000573934 613 ntBASIC17.4■□□□□ 0.38
LIMK2P53671 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.4■□□□□ 0.38
LIMK2P53671 AC114341.1-201ENST00000618070 349 ntBASIC17.4■□□□□ 0.38
LIMK2P53671 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
LIMK2P53671 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.4■□□□□ 0.38
LIMK2P53671 AC105020.1-201ENST00000435356 2205 ntBASIC17.4■□□□□ 0.38
LIMK2P53671 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LIMK2P53671 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
LIMK2P53671 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LIMK2P53671 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LIMK2P53671 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
LIMK2P53671 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
LIMK2P53671 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
LIMK2P53671 AC125634.1-201ENST00000438758 1403 ntBASIC17.39■□□□□ 0.38
LIMK2P53671 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.39■□□□□ 0.38
LIMK2P53671 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
LIMK2P53671 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.39■□□□□ 0.37
LIMK2P53671 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 AC005915.1-201ENST00000624912 2018 ntBASIC17.39■□□□□ 0.37
LIMK2P53671 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
LIMK2P53671 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 AC122714.2-201ENST00000502787 707 ntBASIC17.39■□□□□ 0.37
LIMK2P53671 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.39■□□□□ 0.37
LIMK2P53671 AC064862.7-201ENST00000604520 867 ntBASIC17.39■□□□□ 0.37
LIMK2P53671 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
LIMK2P53671 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.39■□□□□ 0.37
LIMK2P53671 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LIMK2P53671 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LIMK2P53671 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.39■□□□□ 0.37
LIMK2P53671 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.39■□□□□ 0.37
LIMK2P53671 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.39■□□□□ 0.37
LIMK2P53671 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LIMK2P53671 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 AL022342.1-201ENST00000400363 863 ntBASIC17.38■□□□□ 0.37
LIMK2P53671 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
LIMK2P53671 AC079776.4-201ENST00000511039 504 ntBASIC17.38■□□□□ 0.37
LIMK2P53671 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.38■□□□□ 0.37
LIMK2P53671 AC005336.2-201ENST00000593183 939 ntBASIC17.38■□□□□ 0.37
LIMK2P53671 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
LIMK2P53671 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.38■□□□□ 0.37
LIMK2P53671 AC092053.1-201ENST00000605787 1936 ntBASIC17.38■□□□□ 0.37
LIMK2P53671 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
LIMK2P53671 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LIMK2P53671 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LIMK2P53671 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LIMK2P53671 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms