Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TMPOP1-202ENST00000424642 1267 ntBASIC15.33■□□□□ 0.04
SLC25A1P53007 AP002490.2-201ENST00000524791 560 ntBASIC15.33■□□□□ 0.04
SLC25A1P53007 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC25A1P53007 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.33■□□□□ 0.04
SLC25A1P53007 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC25A1P53007 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.33■□□□□ 0.04
SLC25A1P53007 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC25A1P53007 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SLC25A1P53007 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.33■□□□□ 0.04
SLC25A1P53007 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SLC25A1P53007 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC25A1P53007 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC25A1P53007 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC25A1P53007 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.32■□□□□ 0.04
SLC25A1P53007 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 TUBB8P12-201ENST00000308911 1335 ntBASIC15.32■□□□□ 0.04
SLC25A1P53007 TUBB7P-202ENST00000428444 1305 ntBASIC15.32■□□□□ 0.04
SLC25A1P53007 TUBB8P7-204ENST00000567960 1332 ntBASIC15.32■□□□□ 0.04
SLC25A1P53007 AC016734.2-201ENST00000624325 1377 ntBASIC15.32■□□□□ 0.04
SLC25A1P53007 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SLC25A1P53007 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.32■□□□□ 0.04
SLC25A1P53007 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SLC25A1P53007 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC25A1P53007 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SLC25A1P53007 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.31■□□□□ 0.04
SLC25A1P53007 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SLC25A1P53007 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 Z69720.1-201ENST00000601483 472 ntBASIC15.31■□□□□ 0.04
SLC25A1P53007 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 AC005332.1-201ENST00000577698 1310 ntBASIC15.31■□□□□ 0.04
SLC25A1P53007 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 AC233702.3-201ENST00000578656 1387 ntBASIC15.31■□□□□ 0.04
SLC25A1P53007 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 INTS4P1-201ENST00000438455 1935 ntBASIC15.31■□□□□ 0.04
SLC25A1P53007 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
SLC25A1P53007 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC25A1P53007 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SLC25A1P53007 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SLC25A1P53007 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.3■□□□□ 0.04
SLC25A1P53007 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.3■□□□□ 0.04
SLC25A1P53007 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms