Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.96■□□□□ 0.31
GTF2A1P52655 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
GTF2A1P52655 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GTF2A1P52655 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
GTF2A1P52655 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
GTF2A1P52655 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.96■□□□□ 0.3
GTF2A1P52655 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GTF2A1P52655 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GTF2A1P52655 AC124283.5-201ENST00000624661 1809 ntBASIC16.96■□□□□ 0.3
GTF2A1P52655 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
GTF2A1P52655 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.96■□□□□ 0.3
GTF2A1P52655 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.95■□□□□ 0.3
GTF2A1P52655 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
GTF2A1P52655 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GTF2A1P52655 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GTF2A1P52655 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.95■□□□□ 0.3
GTF2A1P52655 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.95■□□□□ 0.3
GTF2A1P52655 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
GTF2A1P52655 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GTF2A1P52655 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.95■□□□□ 0.3
GTF2A1P52655 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
GTF2A1P52655 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.95■□□□□ 0.3
GTF2A1P52655 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
GTF2A1P52655 KRT18P55-202ENST00000578578 1546 ntBASIC16.95■□□□□ 0.3
GTF2A1P52655 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GTF2A1P52655 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GTF2A1P52655 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.94■□□□□ 0.3
GTF2A1P52655 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 DKFZP434A062-201ENST00000573103 5021 ntBASIC16.94■□□□□ 0.3
GTF2A1P52655 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.94■□□□□ 0.3
GTF2A1P52655 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 MIR6821-201ENST00000617625 74 ntBASIC16.94■□□□□ 0.3
GTF2A1P52655 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
GTF2A1P52655 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GTF2A1P52655 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GTF2A1P52655 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.94■□□□□ 0.3
GTF2A1P52655 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.94■□□□□ 0.3
GTF2A1P52655 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.93■□□□□ 0.3
GTF2A1P52655 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GTF2A1P52655 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms