Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.22■□□□□ 0.67
CENPFP49454 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPFP49454 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPFP49454 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CENPFP49454 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CENPFP49454 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.22■□□□□ 0.67
CENPFP49454 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CENPFP49454 GALT-202ENST00000450095 1280 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPFP49454 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.22■□□□□ 0.67
CENPFP49454 ARL16-202ENST00000570561 768 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPFP49454 MIR4538-201ENST00000581377 78 ntBASIC19.22■□□□□ 0.67
CENPFP49454 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.22■□□□□ 0.67
CENPFP49454 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.22■□□□□ 0.67
CENPFP49454 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CENPFP49454 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.21■□□□□ 0.67
CENPFP49454 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.21■□□□□ 0.67
CENPFP49454 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.21■□□□□ 0.67
CENPFP49454 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPFP49454 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CENPFP49454 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CENPFP49454 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.21■□□□□ 0.67
CENPFP49454 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPFP49454 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CENPFP49454 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPFP49454 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.21■□□□□ 0.67
CENPFP49454 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 FAM86MP-201ENST00000340703 885 ntBASIC19.21■□□□□ 0.67
CENPFP49454 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CENPFP49454 AL645728.2-201ENST00000641974 660 ntBASIC19.21■□□□□ 0.67
CENPFP49454 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CENPFP49454 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CENPFP49454 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.21■□□□□ 0.67
CENPFP49454 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CENPFP49454 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CENPFP49454 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.2■□□□□ 0.66
CENPFP49454 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.2■□□□□ 0.66
CENPFP49454 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.2■□□□□ 0.66
CENPFP49454 MIR4259-201ENST00000584466 101 ntBASIC19.2■□□□□ 0.66
CENPFP49454 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CENPFP49454 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.2■□□□□ 0.66
CENPFP49454 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CENPFP49454 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.2■□□□□ 0.66
CENPFP49454 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CENPFP49454 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.2■□□□□ 0.66
CENPFP49454 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CENPFP49454 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 BX276092.7-203ENST00000637198 1536 ntBASIC19.19■□□□□ 0.66
CENPFP49454 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC19.19■□□□□ 0.66
CENPFP49454 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.19■□□□□ 0.66
CENPFP49454 RN7SL752P-201ENST00000463779 287 ntBASIC19.19■□□□□ 0.66
CENPFP49454 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.19■□□□□ 0.66
CENPFP49454 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 REXO1L6P-201ENST00000603433 1515 ntBASIC19.19■□□□□ 0.66
CENPFP49454 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.19■□□□□ 0.66
CENPFP49454 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CENPFP49454 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.19■□□□□ 0.66
CENPFP49454 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.19■□□□□ 0.66
CENPFP49454 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms