Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.19■□□□□ 0.02
CX3CR1P49238 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.19■□□□□ 0.02
CX3CR1P49238 AP005901.3-202ENST00000581653 237 ntBASIC15.19■□□□□ 0.02
CX3CR1P49238 STK25P1-201ENST00000585406 838 ntBASIC15.19■□□□□ 0.02
CX3CR1P49238 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CX3CR1P49238 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.19■□□□□ 0.02
CX3CR1P49238 AC116407.4-201ENST00000623319 1061 ntBASIC15.19■□□□□ 0.02
CX3CR1P49238 AL590326.2-201ENST00000625139 305 ntBASIC15.19■□□□□ 0.02
CX3CR1P49238 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 LINC02012-201ENST00000608206 1725 ntBASIC15.19■□□□□ 0.02
CX3CR1P49238 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.19■□□□□ 0.02
CX3CR1P49238 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.19■□□□□ 0.02
CX3CR1P49238 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CX3CR1P49238 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CX3CR1P49238 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CX3CR1P49238 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CX3CR1P49238 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.18■□□□□ 0.02
CX3CR1P49238 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.18■□□□□ 0.02
CX3CR1P49238 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.18■□□□□ 0.02
CX3CR1P49238 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.18■□□□□ 0.02
CX3CR1P49238 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CX3CR1P49238 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.18■□□□□ 0.02
CX3CR1P49238 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 SLC25A1P3-201ENST00000395415 828 ntBASIC15.18■□□□□ 0.02
CX3CR1P49238 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.18■□□□□ 0.02
CX3CR1P49238 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.18■□□□□ 0.02
CX3CR1P49238 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.18■□□□□ 0.02
CX3CR1P49238 Z69720.1-201ENST00000601483 472 ntBASIC15.18■□□□□ 0.02
CX3CR1P49238 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 IER3-202ENST00000376377 1350 ntBASIC15.18■□□□□ 0.02
CX3CR1P49238 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 AC233702.3-201ENST00000578656 1387 ntBASIC15.18■□□□□ 0.02
CX3CR1P49238 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CX3CR1P49238 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CR1P49238 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CR1P49238 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.17■□□□□ 0.02
CX3CR1P49238 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CR1P49238 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 AL139384.1-201ENST00000612143 3047 ntBASIC15.17■□□□□ 0.02
CX3CR1P49238 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.17■□□□□ 0.02
CX3CR1P49238 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CX3CR1P49238 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 AL353593.2-201ENST00000602529 1483 ntBASIC15.17■□□□□ 0.02
CX3CR1P49238 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.17■□□□□ 0.02
CX3CR1P49238 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.17■□□□□ 0.02
CX3CR1P49238 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 MINOS1P3-201ENST00000457048 203 ntBASIC15.17■□□□□ 0.02
CX3CR1P49238 STK19B-204ENST00000512515 211 ntBASIC15.17■□□□□ 0.02
CX3CR1P49238 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.17■□□□□ 0.02
CX3CR1P49238 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CX3CR1P49238 AC011467.2-201ENST00000598425 242 ntBASIC15.17■□□□□ 0.02
CX3CR1P49238 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.17■□□□□ 0.02
CX3CR1P49238 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CX3CR1P49238 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CX3CR1P49238 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CX3CR1P49238 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CX3CR1P49238 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.16■□□□□ 0.02
CX3CR1P49238 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CR1P49238 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CX3CR1P49238 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.16■□□□□ 0.02
CX3CR1P49238 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.16■□□□□ 0.02
CX3CR1P49238 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms