Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 GPX1P2-201ENST00000429271 606 ntBASIC16.28■□□□□ 0.2
GABRA4P48169 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRA4P48169 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRA4P48169 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.28■□□□□ 0.2
GABRA4P48169 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 GPALPP1-207ENST00000611650 899 ntBASIC16.28■□□□□ 0.2
GABRA4P48169 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRA4P48169 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
GABRA4P48169 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 CROCCP2-202ENST00000412962 2773 ntBASIC16.28■□□□□ 0.2
GABRA4P48169 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRA4P48169 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.28■□□□□ 0.2
GABRA4P48169 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.28■□□□□ 0.2
GABRA4P48169 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GABRA4P48169 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 PP12613-201ENST00000424958 2230 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.27■□□□□ 0.2
GABRA4P48169 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRA4P48169 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRA4P48169 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
GABRA4P48169 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
GABRA4P48169 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.27■□□□□ 0.2
GABRA4P48169 AC129492.6-201ENST00000611383 1305 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 AC112482.1-201ENST00000492080 688 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.27■□□□□ 0.2
GABRA4P48169 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 KRT19P2-202ENST00000557173 1012 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 DUX4L17-201ENST00000557360 1267 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 AC010327.4-202ENST00000591484 748 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 MTDHP5-201ENST00000598980 586 ntBASIC16.27■□□□□ 0.2
GABRA4P48169 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.27■□□□□ 0.2
GABRA4P48169 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GABRA4P48169 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
GABRA4P48169 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
GABRA4P48169 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
GABRA4P48169 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
GABRA4P48169 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
GABRA4P48169 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
GABRA4P48169 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 DNAJB3-201ENST00000446806 729 ntBASIC16.26■□□□□ 0.19
GABRA4P48169 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.26■□□□□ 0.19
GABRA4P48169 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
GABRA4P48169 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.26■□□□□ 0.19
GABRA4P48169 PDPK2P-202ENST00000562415 1191 ntBASIC16.26■□□□□ 0.19
GABRA4P48169 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.26■□□□□ 0.19
GABRA4P48169 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.26■□□□□ 0.19
GABRA4P48169 AC055717.3-201ENST00000622967 595 ntBASIC16.26■□□□□ 0.19
GABRA4P48169 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms