Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.48■□□□□ 0.39
HADHAP40939 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
HADHAP40939 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
HADHAP40939 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
HADHAP40939 AC011676.5-201ENST00000624864 2660 ntBASIC17.47■□□□□ 0.39
HADHAP40939 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.47■□□□□ 0.39
HADHAP40939 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.47■□□□□ 0.39
HADHAP40939 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.47■□□□□ 0.39
HADHAP40939 FOSL1P1-201ENST00000511041 816 ntBASIC17.47■□□□□ 0.39
HADHAP40939 STK19B-204ENST00000512515 211 ntBASIC17.47■□□□□ 0.39
HADHAP40939 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.47■□□□□ 0.39
HADHAP40939 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.47■□□□□ 0.39
HADHAP40939 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 AL121772.3-201ENST00000610840 674 ntBASIC17.47■□□□□ 0.39
HADHAP40939 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.47■□□□□ 0.39
HADHAP40939 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HADHAP40939 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HADHAP40939 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HADHAP40939 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.47■□□□□ 0.39
HADHAP40939 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 AC046185.3-201ENST00000623228 1824 ntBASIC17.47■□□□□ 0.39
HADHAP40939 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HADHAP40939 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HADHAP40939 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HADHAP40939 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HADHAP40939 KLF4P1-201ENST00000412782 1185 ntBASIC17.46■□□□□ 0.39
HADHAP40939 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.46■□□□□ 0.39
HADHAP40939 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 PRELID1P1-202ENST00000567272 903 ntBASIC17.46■□□□□ 0.39
HADHAP40939 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.46■□□□□ 0.39
HADHAP40939 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.46■□□□□ 0.39
HADHAP40939 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HADHAP40939 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.46■□□□□ 0.39
HADHAP40939 AC073592.5-201ENST00000624854 528 ntBASIC17.46■□□□□ 0.39
HADHAP40939 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.46■□□□□ 0.39
HADHAP40939 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.46■□□□□ 0.39
HADHAP40939 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HADHAP40939 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HADHAP40939 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.46■□□□□ 0.39
HADHAP40939 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HADHAP40939 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 PMPCAP1-201ENST00000508114 1576 ntBASIC17.45■□□□□ 0.38
HADHAP40939 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
HADHAP40939 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 ABCD1P5-201ENST00000445663 754 ntBASIC17.45■□□□□ 0.38
HADHAP40939 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.45■□□□□ 0.38
HADHAP40939 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.45■□□□□ 0.38
HADHAP40939 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.45■□□□□ 0.38
HADHAP40939 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.45■□□□□ 0.38
HADHAP40939 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HADHAP40939 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.45■□□□□ 0.38
HADHAP40939 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 AP000867.4-201ENST00000641616 219 ntBASIC17.45■□□□□ 0.38
HADHAP40939 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
HADHAP40939 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.45■□□□□ 0.38
HADHAP40939 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.45■□□□□ 0.38
HADHAP40939 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms