Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.84■□□□□ 0.61
USP8P40818 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.84■□□□□ 0.61
USP8P40818 IGHV3-52-201ENST00000519770 353 ntBASIC18.84■□□□□ 0.61
USP8P40818 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.84■□□□□ 0.61
USP8P40818 TPSP2-201ENST00000561760 610 ntBASIC18.84■□□□□ 0.61
USP8P40818 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
USP8P40818 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.84■□□□□ 0.61
USP8P40818 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.84■□□□□ 0.61
USP8P40818 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.84■□□□□ 0.61
USP8P40818 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
USP8P40818 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
USP8P40818 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP8P40818 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
USP8P40818 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.83■□□□□ 0.61
USP8P40818 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.83■□□□□ 0.61
USP8P40818 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
USP8P40818 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
USP8P40818 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP8P40818 FAM220CP-201ENST00000395253 831 ntBASIC18.83■□□□□ 0.6
USP8P40818 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.83■□□□□ 0.6
USP8P40818 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.83■□□□□ 0.6
USP8P40818 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.83■□□□□ 0.6
USP8P40818 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.83■□□□□ 0.6
USP8P40818 Z69720.1-201ENST00000601483 472 ntBASIC18.83■□□□□ 0.6
USP8P40818 AC069148.1-201ENST00000608741 768 ntBASIC18.83■□□□□ 0.6
USP8P40818 AC091076.1-201ENST00000610741 619 ntBASIC18.83■□□□□ 0.6
USP8P40818 AL139327.4-201ENST00000612362 153 ntBASIC18.83■□□□□ 0.6
USP8P40818 AC093458.2-201ENST00000623150 629 ntBASIC18.83■□□□□ 0.6
USP8P40818 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
USP8P40818 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
USP8P40818 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP8P40818 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.82■□□□□ 0.6
USP8P40818 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 AL596257.1-201ENST00000641463 2694 ntBASIC18.82■□□□□ 0.6
USP8P40818 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.82■□□□□ 0.6
USP8P40818 AC002558.1-201ENST00000488906 803 ntBASIC18.82■□□□□ 0.6
USP8P40818 AP000867.3-201ENST00000524675 377 ntBASIC18.82■□□□□ 0.6
USP8P40818 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.82■□□□□ 0.6
USP8P40818 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP8P40818 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP8P40818 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP8P40818 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP8P40818 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms