Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CEACAM3P40198 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CEACAM3P40198 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.1□□□□□ -0.15
CEACAM3P40198 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 FGFR3P6-201ENST00000457012 610 ntBASIC14.09□□□□□ -0.15
CEACAM3P40198 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.09□□□□□ -0.15
CEACAM3P40198 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 RN7SL510P-201ENST00000581311 263 ntBASIC14.09□□□□□ -0.15
CEACAM3P40198 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.09□□□□□ -0.15
CEACAM3P40198 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.09□□□□□ -0.15
CEACAM3P40198 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CEACAM3P40198 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CEACAM3P40198 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CEACAM3P40198 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.08□□□□□ -0.15
CEACAM3P40198 NCF1C-201ENST00000438382 1427 ntBASIC14.08□□□□□ -0.15
CEACAM3P40198 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.08□□□□□ -0.16
CEACAM3P40198 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 MST1L-201ENST00000442552 2185 ntBASIC14.08□□□□□ -0.16
CEACAM3P40198 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 RPS2P28-201ENST00000314255 741 ntBASIC14.08□□□□□ -0.16
CEACAM3P40198 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 ACTG1P4-201ENST00000425123 1122 ntBASIC14.08□□□□□ -0.16
CEACAM3P40198 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.08□□□□□ -0.16
CEACAM3P40198 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.08□□□□□ -0.16
CEACAM3P40198 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.08□□□□□ -0.16
CEACAM3P40198 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.08□□□□□ -0.16
CEACAM3P40198 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.08□□□□□ -0.16
CEACAM3P40198 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 AL121912.1-201ENST00000603683 238 ntBASIC14.08□□□□□ -0.16
CEACAM3P40198 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.08□□□□□ -0.16
CEACAM3P40198 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CEACAM3P40198 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CEACAM3P40198 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms