Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 HMGA1P5-201ENST00000412453 271 ntBASIC14.25□□□□□ -0.13
SNCAP37840 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.25□□□□□ -0.13
SNCAP37840 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.25□□□□□ -0.13
SNCAP37840 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.25□□□□□ -0.13
SNCAP37840 AL355075.4-201ENST00000554988 638 ntBASIC14.25□□□□□ -0.13
SNCAP37840 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.25□□□□□ -0.13
SNCAP37840 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.25□□□□□ -0.13
SNCAP37840 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC14.25□□□□□ -0.13
SNCAP37840 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SNCAP37840 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
SNCAP37840 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SNCAP37840 CYP2T1P-202ENST00000641596 2535 ntBASIC14.24□□□□□ -0.13
SNCAP37840 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.24□□□□□ -0.13
SNCAP37840 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 AL513523.2-202ENST00000427283 2040 ntBASIC14.24□□□□□ -0.13
SNCAP37840 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC14.24□□□□□ -0.13
SNCAP37840 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SNCAP37840 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SNCAP37840 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SNCAP37840 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 AC023824.1-201ENST00000562945 2975 ntBASIC14.24□□□□□ -0.13
SNCAP37840 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SNCAP37840 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SNCAP37840 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
SNCAP37840 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.23□□□□□ -0.13
SNCAP37840 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.23□□□□□ -0.13
SNCAP37840 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.23□□□□□ -0.13
SNCAP37840 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SNCAP37840 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 MMP23A-201ENST00000234610 1017 ntBASIC14.23□□□□□ -0.13
SNCAP37840 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.23□□□□□ -0.13
SNCAP37840 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 PVRIG2P-201ENST00000435460 978 ntBASIC14.23□□□□□ -0.13
SNCAP37840 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.23□□□□□ -0.13
SNCAP37840 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.23□□□□□ -0.13
SNCAP37840 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.23□□□□□ -0.13
SNCAP37840 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.23□□□□□ -0.13
SNCAP37840 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SNCAP37840 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.23□□□□□ -0.13
SNCAP37840 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.23□□□□□ -0.13
SNCAP37840 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms