Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.01■□□□□ 0.31
VARSP26640 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 COX5BP2-201ENST00000392354 334 ntBASIC17.01■□□□□ 0.31
VARSP26640 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.01■□□□□ 0.31
VARSP26640 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.01■□□□□ 0.31
VARSP26640 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.01■□□□□ 0.31
VARSP26640 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.01■□□□□ 0.31
VARSP26640 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
VARSP26640 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.01■□□□□ 0.31
VARSP26640 AC006538.3-201ENST00000612495 578 ntBASIC17.01■□□□□ 0.31
VARSP26640 AC117500.6-201ENST00000624871 588 ntBASIC17.01■□□□□ 0.31
VARSP26640 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.01■□□□□ 0.31
VARSP26640 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.01■□□□□ 0.31
VARSP26640 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VARSP26640 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17■□□□□ 0.31
VARSP26640 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17■□□□□ 0.31
VARSP26640 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VARSP26640 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
VARSP26640 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17■□□□□ 0.31
VARSP26640 AL022342.1-201ENST00000400363 863 ntBASIC17■□□□□ 0.31
VARSP26640 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VARSP26640 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17■□□□□ 0.31
VARSP26640 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17■□□□□ 0.31
VARSP26640 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
VARSP26640 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17■□□□□ 0.31
VARSP26640 AC023511.2-201ENST00000618803 211 ntBASIC17■□□□□ 0.31
VARSP26640 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VARSP26640 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
VARSP26640 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17■□□□□ 0.31
VARSP26640 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17■□□□□ 0.31
VARSP26640 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17■□□□□ 0.31
VARSP26640 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17■□□□□ 0.31
VARSP26640 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VARSP26640 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17■□□□□ 0.31
VARSP26640 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
VARSP26640 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 LINC00554-201ENST00000564841 3011 ntBASIC16.99■□□□□ 0.31
VARSP26640 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 AC104819.1-201ENST00000504587 486 ntBASIC16.99■□□□□ 0.31
VARSP26640 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 AC106795.1-205ENST00000512851 1056 ntBASIC16.99■□□□□ 0.31
VARSP26640 AP000867.3-201ENST00000524675 377 ntBASIC16.99■□□□□ 0.31
VARSP26640 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.99■□□□□ 0.31
VARSP26640 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.99■□□□□ 0.31
VARSP26640 Z69720.1-201ENST00000601483 472 ntBASIC16.99■□□□□ 0.31
VARSP26640 AC064862.7-201ENST00000604520 867 ntBASIC16.99■□□□□ 0.31
VARSP26640 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.99■□□□□ 0.31
VARSP26640 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VARSP26640 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VARSP26640 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms